track H9_raw
superTrack on show
group signal
shortLabel PEPPRO H9 replicates
longLabel H9 signal tracks from DMSO and romidepsin treated samples
maxHeightPixels 100:50:16 
windowingFunction maximum
viewLimits -0.000007:0.000007
type bigWig 0 1000
visibility full
gridDefault off
yLineOnOff off

    track H9_PRO-seq_1
    parent H9_raw
    shortLabel H9_PRO-seq_1
    longLabel H9 DMSO 1
    container multiWig
    aggregate transparentOverlay
    showSubtrackColorOnUi on
    visibility full
    type bigWig 0 1000
    maxHeightPixels 100:50:16
    autoScale on
    smoothingWindow 5

      track H9_PRO-seq_1_plus_exact_body_0-mer.bw
      parent H9_PRO-seq_1
      bigDataUrl http://big.databio.org/peppro/genome_browser/trackHub/hg38/H9_PRO-seq_1_plus_exact_body_0-mer.bw
      shortLabel H9_PRO-seq_1_plus
      longLabel H9 DMSO 1 (+)
      type bigWig
      color 30,144,200
      visibility full

      track H9_PRO-seq_1_minus_exact_body_0-mer.bw
      parent H9_PRO-seq_1
      bigDataUrl http://big.databio.org/peppro/genome_browser/trackHub/hg38/H9_PRO-seq_1_minus_exact_body_0-mer.bw
      shortLabel H9_PRO-seq_1_minus
      longLabel H9 DMSO 1 (-)
      type bigWig
      color 50,50,100
      altColor 50,50,100
      negateValues on
      visibility full

    track H9_PRO-seq_2
    parent H9_raw
    shortLabel H9_PRO-seq_2
    longLabel H9 DMSO 2
    container multiWig
    aggregate transparentOverlay
    showSubtrackColorOnUi on
    visibility full
    type bigWig 0 1000
    maxHeightPixels 100:50:16
    autoScale on
    smoothingWindow 5

      track H9_PRO-seq_2_plus_exact_body_0-mer.bw
      parent H9_PRO-seq_2
      bigDataUrl http://big.databio.org/peppro/genome_browser/trackHub/hg38/H9_PRO-seq_2_plus_exact_body_0-mer.bw
      shortLabel H9_PRO-seq_2_plus
      longLabel H9 DMSO 2 (+)
      type bigWig
      color 30,144,200
      visibility full

      track H9_PRO-seq_2_minus_exact_body_0-mer.bw
      parent H9_PRO-seq_2
      bigDataUrl http://big.databio.org/peppro/genome_browser/trackHub/hg38/H9_PRO-seq_2_minus_exact_body_0-mer.bw
      shortLabel H9_PRO-seq_2_minus
      longLabel H9 DMSO 2 (-)
      type bigWig
      color 50,50,100
      altColor 50,50,100
      negateValues on
      visibility full

    track H9_PRO-seq_3
    parent H9_raw
    shortLabel H9_PRO-seq_3
    longLabel H9 DMSO 3
    container multiWig
    aggregate transparentOverlay
    showSubtrackColorOnUi on
    visibility full
    type bigWig 0 1000
    maxHeightPixels 100:50:16
    autoScale on
    smoothingWindow 5

      track H9_PRO-seq_3_plus_body_0-mer.bw
      parent H9_PRO-seq_3
      bigDataUrl http://big.databio.org/peppro/genome_browser/trackHub/hg38/H9_PRO-seq_3_plus_body_0-mer.bw
      shortLabel H9_PRO-seq_3_plus
      longLabel H9 DMSO 3 (+)
      type bigWig
      color 30,144,200
      visibility full

      track H9_PRO-seq_3_minus_body_0-mer.bw
      parent H9_PRO-seq_3
      bigDataUrl http://big.databio.org/peppro/genome_browser/trackHub/hg38/H9_PRO-seq_3_minus_body_0-mer.bw
      shortLabel H9_PRO-seq_3_minus
      longLabel H9 DMSO 3 (-)
      type bigWig
      color 50,50,100
      altColor 50,50,100
      negateValues on
      visibility full

    track H9_treated_PRO-seq_1
    parent H9_raw
    shortLabel H9_treated_PRO-seq_1
    longLabel H9 200nM romidepsin 1
    container multiWig
    aggregate transparentOverlay
    showSubtrackColorOnUi on
    visibility full
    type bigWig 0 1000
    maxHeightPixels 100:50:16
    autoScale on
    smoothingWindow 5

      track H9_200nM_romidepsin_rep1_plus_body_0-mer.bw
      parent H9_treated_PRO-seq_1
      bigDataUrl http://big.databio.org/peppro/genome_browser/trackHub/hg38/H9_200nM_romidepsin_rep1_plus_body_0-mer.bw
      shortLabel H9_treated_PRO-seq_1_plus
      longLabel H9 200nM romidepsin 1 (+)
      type bigWig
      color 30,144,200
      visibility full

      track H9_200nM_romidepsin_rep1_minus_body_0-mer.bw
      parent H9_treated_PRO-seq_1
      bigDataUrl http://big.databio.org/peppro/genome_browser/trackHub/hg38/H9_200nM_romidepsin_rep1_minus_body_0-mer.bw
      shortLabel H9_treated_PRO-seq_1_minus
      longLabel H9 200nM romidepsin 1 (-)
      type bigWig
      color 50,50,100
      altColor 50,50,100
      negateValues on
      visibility full
      
    track H9_treated_PRO-seq_2
    parent H9_raw
    shortLabel H9_treated_PRO-seq_2
    longLabel H9 200nM romidepsin 2
    container multiWig
    aggregate transparentOverlay
    showSubtrackColorOnUi on
    visibility full
    type bigWig 0 1000
    maxHeightPixels 100:50:16
    autoScale on
    smoothingWindow 5

      track H9_200nM_romidepsin_rep2_plus_body_0-mer.bw
      parent H9_treated_PRO-seq_2
      bigDataUrl http://big.databio.org/peppro/genome_browser/trackHub/hg38/H9_200nM_romidepsin_rep2_plus_body_0-mer.bw
      shortLabel H9_treated_PRO-seq_2_plus
      longLabel H9 200nM romidepsin 2 (+)
      type bigWig
      color 30,144,200
      visibility full

      track H9_200nM_romidepsin_rep2_minus_body_0-mer.bw
      parent H9_treated_PRO-seq_2
      bigDataUrl http://big.databio.org/peppro/genome_browser/trackHub/hg38/H9_200nM_romidepsin_rep2_minus_body_0-mer.bw
      shortLabel H9_treated_PRO-seq_2_minus
      longLabel H9 200nM romidepsin 2 (-)
      type bigWig
      color 50,50,100
      altColor 50,50,100
      negateValues on
      visibility full
      
    track H9_treated_PRO-seq_3
    parent H9_raw
    shortLabel H9_treated_PRO-seq_3
    longLabel H9 200nM romidepsin 3
    container multiWig
    aggregate transparentOverlay
    showSubtrackColorOnUi on
    visibility full
    type bigWig 0 1000
    maxHeightPixels 100:50:16
    autoScale on
    smoothingWindow 5

      track H9_200nM_romidepsin_rep3_plus_body_0-mer.bw
      parent H9_treated_PRO-seq_3
      bigDataUrl http://big.databio.org/peppro/genome_browser/trackHub/hg38/H9_200nM_romidepsin_rep3_plus_body_0-mer.bw
      shortLabel H9_treated_PRO-seq_3_plus
      longLabel H9 200nM romidepsin 3 (+)
      type bigWig
      color 30,144,200
      visibility full

      track H9_200nM_romidepsin_rep3_minus_body_0-mer.bw
      parent H9_treated_PRO-seq_3
      bigDataUrl http://big.databio.org/peppro/genome_browser/trackHub/hg38/H9_200nM_romidepsin_rep3_minus_body_0-mer.bw
      shortLabel H9_treated_PRO-seq_3_minus
      longLabel H9 200nM romidepsin 3 (-)
      type bigWig
      color 50,50,100
      altColor 50,50,100
      negateValues on
      visibility full

    track H9_untreated_PRO-seq_1
    parent H9_raw
    shortLabel H9_untreated_PRO-seq_1
    longLabel H9 DMSO 1
    container multiWig
    aggregate transparentOverlay
    showSubtrackColorOnUi on
    visibility full
    type bigWig 0 1000
    maxHeightPixels 100:50:16
    autoScale on
    smoothingWindow 5

      track H9_DMSO_rep1_plus_body_0-mer.bw
      parent H9_untreated_PRO-seq_1
      bigDataUrl http://big.databio.org/peppro/genome_browser/trackHub/hg38/H9_DMSO_rep1_plus_body_0-mer.bw
      shortLabel H9_untreated_PRO-seq_1_plus
      longLabel H9 DMSO 1 (+)
      type bigWig
      color 30,144,200
      visibility full

      track H9_DMSO_rep1_minus_body_0-mer.bw
      parent H9_untreated_PRO-seq_1
      bigDataUrl http://big.databio.org/peppro/genome_browser/trackHub/hg38/H9_DMSO_rep1_minus_body_0-mer.bw
      shortLabel H9_untreated_PRO-seq_1_minus
      longLabel H9 DMSO 1 (-)
      type bigWig
      color 50,50,100
      altColor 50,50,100
      negateValues on
      visibility full
      
    track H9_untreated_PRO-seq_2
    parent H9_raw
    shortLabel H9_untreated_PRO-seq_2
    longLabel H9 DMSO 2
    container multiWig
    aggregate transparentOverlay
    showSubtrackColorOnUi on
    visibility full
    type bigWig 0 1000
    maxHeightPixels 100:50:16
    autoScale on
    smoothingWindow 5

      track H9_DMSO_rep2_plus_body_0-mer.bw
      parent H9_untreated_PRO-seq_2
      bigDataUrl http://big.databio.org/peppro/genome_browser/trackHub/hg38/H9_DMSO_rep2_plus_body_0-mer.bw
      shortLabel H9_untreated_PRO-seq_2_plus
      longLabel H9 DMSO 2 (+)
      type bigWig
      color 30,144,200
      visibility full

      track H9_DMSO_rep2_minus_body_0-mer.bw
      parent H9_untreated_PRO-seq_2
      bigDataUrl http://big.databio.org/peppro/genome_browser/trackHub/hg38/H9_DMSO_rep2_minus_body_0-mer.bw
      shortLabel H9_untreated_PRO-seq_2_minus
      longLabel H9 DMSO 2 (-)
      type bigWig
      color 50,50,100
      altColor 50,50,100
      negateValues on
      visibility full
      
    track H9_untreated_PRO-seq_3
    parent H9_raw
    shortLabel H9_untreated_PRO-seq_3
    longLabel H9 DMSO 3
    container multiWig
    aggregate transparentOverlay
    showSubtrackColorOnUi on
    visibility full
    type bigWig 0 1000
    maxHeightPixels 100:50:16
    autoScale on
    smoothingWindow 5

      track H9_DMSO_rep3_plus_body_0-mer.bw
      parent H9_untreated_PRO-seq_3
      bigDataUrl http://big.databio.org/peppro/genome_browser/trackHub/hg38/H9_DMSO_rep3_plus_body_0-mer.bw
      shortLabel H9_untreated_PRO-seq_3_plus
      longLabel H9 DMSO 3 (+)
      type bigWig
      color 30,144,200
      visibility full

      track H9_DMSO_rep3_minus_body_0-mer.bw
      parent H9_untreated_PRO-seq_3
      bigDataUrl http://big.databio.org/peppro/genome_browser/trackHub/hg38/H9_DMSO_rep3_minus_body_0-mer.bw
      shortLabel H9_untreated_PRO-seq_3_minus
      longLabel H9 DMSO 3 (-)
      type bigWig
      color 50,50,100
      altColor 50,50,100
      negateValues on
      visibility full


track H9_scale
superTrack on show
group signal
shortLabel PEPPRO H9 replicates
longLabel H9 signal tracks from DMSO and romidepsin treated samples
maxHeightPixels 100:50:16 
windowingFunction maximum
viewLimits -0.000007:0.000007
type bigWig 0 1000
visibility full
gridDefault off
yLineOnOff off

    track H9_PRO-seq_1_scale
    parent H9_scale
    shortLabel H9_PRO-seq_1
    longLabel H9 DMSO 1
    container multiWig
    aggregate transparentOverlay
    showSubtrackColorOnUi on
    visibility full
    type bigWig 0 1000
    maxHeightPixels 100:50:16
    autoScale on
    smoothingWindow 5

      track H9_PRO-seq_1_scale_plus_exact_body_0-mer.bw
      parent H9_PRO-seq_1_scale
      bigDataUrl http://big.databio.org/peppro/genome_browser/trackHub/hg38/H9_PRO-seq_1_scale_plus_exact_body_0-mer.bw
      shortLabel H9_PRO-seq_1_scale_plus
      longLabel H9 DMSO 1 (+)
      type bigWig
      color 30,144,200
      visibility full

      track H9_PRO-seq_1_scale_minus_exact_body_0-mer.bw
      parent H9_PRO-seq_1_scale
      bigDataUrl http://big.databio.org/peppro/genome_browser/trackHub/hg38/H9_PRO-seq_1_scale_minus_exact_body_0-mer.bw
      shortLabel H9_PRO-seq_1_scale_minus
      longLabel H9 DMSO 1 (-)
      type bigWig
      color 50,50,100
      altColor 50,50,100
      negateValues on
      visibility full

    track H9_PRO-seq_2_scale
    parent H9_scale
    shortLabel H9_PRO-seq_2
    longLabel H9 DMSO 2
    container multiWig
    aggregate transparentOverlay
    showSubtrackColorOnUi on
    visibility full
    type bigWig 0 1000
    maxHeightPixels 100:50:16
    autoScale on
    smoothingWindow 5

      track H9_PRO-seq_2_scale_plus_exact_body_0-mer.bw
      parent H9_PRO-seq_2_scale
      bigDataUrl http://big.databio.org/peppro/genome_browser/trackHub/hg38/H9_PRO-seq_2_scale_plus_exact_body_0-mer.bw
      shortLabel H9_PRO-seq_2_scale_plus
      longLabel H9 DMSO 2 (+)
      type bigWig
      color 30,144,200
      visibility full

      track H9_PRO-seq_2_scale_minus_exact_body_0-mer.bw
      parent H9_PRO-seq_2_scale
      bigDataUrl http://big.databio.org/peppro/genome_browser/trackHub/hg38/H9_PRO-seq_2_scale_minus_exact_body_0-mer.bw
      shortLabel H9_PRO-seq_2_scale_minus
      longLabel H9 DMSO 2 (-)
      type bigWig
      color 50,50,100
      altColor 50,50,100
      negateValues on
      visibility full

    track H9_PRO-seq_3_scale
    parent H9_scale
    shortLabel H9_PRO-seq_3
    longLabel H9 DMSO 3
    container multiWig
    aggregate transparentOverlay
    showSubtrackColorOnUi on
    visibility full
    type bigWig 0 1000
    maxHeightPixels 100:50:16
    autoScale on
    smoothingWindow 5

      track H9_PRO-seq_3_scale_plus_exact_body_0-mer.bw
      parent H9_PRO-seq_3_scale
      bigDataUrl http://big.databio.org/peppro/genome_browser/trackHub/hg38/H9_PRO-seq_3_scale_plus_exact_body_0-mer.bw
      shortLabel H9_PRO-seq_3_scale_plus
      longLabel H9 DMSO 3 (+)
      type bigWig
      color 30,144,200
      visibility full

      track H9_PRO-seq_3_scale_minus_exact_body_0-mer.bw
      parent H9_PRO-seq_3_scale
      bigDataUrl http://big.databio.org/peppro/genome_browser/trackHub/hg38/H9_PRO-seq_3_scale_minus_exact_body_0-mer.bw
      shortLabel H9_PRO-seq_3_scale_minus
      longLabel H9 DMSO 3 (-)
      type bigWig
      color 50,50,100
      altColor 50,50,100
      negateValues on
      visibility full

    track H9_treated_PRO-seq_1_scale
    parent H9_scale
    shortLabel H9_treated_PRO-seq_1
    longLabel H9 200nM romidepsin 1
    container multiWig
    aggregate transparentOverlay
    showSubtrackColorOnUi on
    visibility full
    type bigWig 0 1000
    maxHeightPixels 100:50:16
    autoScale on
    smoothingWindow 5

      track H9_treated_PRO-seq_1_scale_plus_exact_body_0-mer.bw
      parent H9_treated_PRO-seq_1_scale
      bigDataUrl http://big.databio.org/peppro/genome_browser/trackHub/hg38/H9_treated_PRO-seq_1_scale_plus_exact_body_0-mer.bw
      shortLabel H9_treated_PRO-seq_1_scale_plus
      longLabel H9 200nM romidepsin 1 (+)
      type bigWig
      color 30,144,200
      visibility full

      track H9_treated_PRO-seq_1_scale_minus_exact_body_0-mer.bw
      parent H9_treated_PRO-seq_1_scale
      bigDataUrl http://big.databio.org/peppro/genome_browser/trackHub/hg38/H9_treated_PRO-seq_1_scale_minus_exact_body_0-mer.bw
      shortLabel H9_treated_PRO-seq_1_scale_minus
      longLabel H9 200nM romidepsin 1 (-)
      type bigWig
      color 50,50,100
      altColor 50,50,100
      negateValues on
      visibility full
      
    track H9_treated_PRO-seq_2_scale
    parent H9_scale
    shortLabel H9_treated_PRO-seq_2
    longLabel H9 200nM romidepsin 2
    container multiWig
    aggregate transparentOverlay
    showSubtrackColorOnUi on
    visibility full
    type bigWig 0 1000
    maxHeightPixels 100:50:16
    autoScale on
    smoothingWindow 5

      track H9_treated_PRO-seq_2_scale_plus_exact_body_0-mer.bw
      parent H9_treated_PRO-seq_2_scale
      bigDataUrl http://big.databio.org/peppro/genome_browser/trackHub/hg38/H9_treated_PRO-seq_2_scale_plus_exact_body_0-mer.bw
      shortLabel H9_treated_PRO-seq_2_scale_plus
      longLabel H9 200nM romidepsin 2 (+)
      type bigWig
      color 30,144,200
      visibility full

      track H9_treated_PRO-seq_2_scale_minus_exact_body_0-mer.bw
      parent H9_treated_PRO-seq_2_scale
      bigDataUrl http://big.databio.org/peppro/genome_browser/trackHub/hg38/H9_treated_PRO-seq_2_scale_minus_exact_body_0-mer.bw
      shortLabel H9_treated_PRO-seq_2_scale_minus
      longLabel H9 200nM romidepsin 2 (-)
      type bigWig
      color 50,50,100
      altColor 50,50,100
      negateValues on
      visibility full
      
    track H9_treated_PRO-seq_3_scale
    parent H9_scale
    shortLabel H9_treated_PRO-seq_3
    longLabel H9 200nM romidepsin 3
    container multiWig
    aggregate transparentOverlay
    showSubtrackColorOnUi on
    visibility full
    type bigWig 0 1000
    maxHeightPixels 100:50:16
    autoScale on
    smoothingWindow 5

      track H9_treated_PRO-seq_3_scale_plus_exact_body_0-mer.bw
      parent H9_treated_PRO-seq_3_scale
      bigDataUrl http://big.databio.org/peppro/genome_browser/trackHub/hg38/H9_treated_PRO-seq_3_scale_plus_exact_body_0-mer.bw
      shortLabel H9_treated_PRO-seq_3_scale_plus
      longLabel H9 200nM romidepsin 3 (+)
      type bigWig
      color 30,144,200
      visibility full

      track H9_treated_PRO-seq_3_scale_minus_exact_body_0-mer.bw
      parent H9_treated_PRO-seq_3_scale
      bigDataUrl http://big.databio.org/peppro/genome_browser/trackHub/hg38/H9_treated_PRO-seq_3_scale_minus_exact_body_0-mer.bw
      shortLabel H9_treated_PRO-seq_3_scale_minus
      longLabel H9 200nM romidepsin 3 (-)
      type bigWig
      color 50,50,100
      altColor 50,50,100
      negateValues on
      visibility full